717 lines
22 KiB
Python
717 lines
22 KiB
Python
#!/usr/bin/env python3
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# external packages required for full functionality:
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# numpy scipy h5py sklearn dotmap
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# BIG TODO: ensure numpy isn't upcasting to float64 *anywhere*.
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# this is gonna take some work.
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from optim_nn_core import *
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from optim_nn_core import _check, _f
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import sys
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def lament(*args, **kwargs):
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print(*args, file=sys.stderr, **kwargs)
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def log(left, right):
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lament("{:>20}: {}".format(left, right))
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class Dummy:
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pass
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# Loss functions {{{1
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class SquaredHalved(ResidualLoss):
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def f(self, r):
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return np.square(r) / 2
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def df(self, r):
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return r
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class SomethingElse(ResidualLoss):
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# generalizes Absolute and SquaredHalved
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# plot: https://www.desmos.com/calculator/fagjg9vuz7
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def __init__(self, a=4/3):
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assert 1 <= a <= 2, "parameter out of range"
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self.a = _f(a / 2)
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self.b = _f(2 / a)
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self.c = _f(2 / a - 1)
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def f(self, r):
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return self.a * np.abs(r)**self.b
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def df(self, r):
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return np.sign(r) * np.abs(r)**self.c
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# Nonparametric Layers {{{1
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# Parametric Layers {{{1
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class LayerNorm(Layer):
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# paper: https://arxiv.org/abs/1607.06450
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# note: nonparametric when affine == False
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def __init__(self, eps=1e-5, affine=True):
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super().__init__()
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self.eps = _f(eps)
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self.affine = bool(affine)
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self.size = None
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def make_shape(self, shape):
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super().make_shape(shape)
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if len(shape) != 1:
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return False
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self.features = shape[0]
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if self.affine:
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self.size = 2 * self.features
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return shape
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def init(self, W, dW):
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super().init(W, dW)
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f = self.features
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self.gamma, self.dgamma = self.W[0*f:1*f], self.dW[0*f:1*f]
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self.beta, self.dbeta = self.W[1*f:2*f], self.dW[1*f:2*f]
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self.gamma[:] = 1
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self.beta[:] = 0
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def F(self, X):
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self.mean = X.mean(0)
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self.center = X - self.mean
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self.var = self.center.var(0) + self.eps
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self.std = np.sqrt(self.var)
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self.Xnorm = self.center / self.std
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if self.affine:
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return self.gamma * self.Xnorm + self.beta
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return self.Xnorm
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def dF(self, dY):
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length = dY.shape[0]
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if self.affine:
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dXnorm = dY * self.gamma
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self.dgamma[:] = (dY * self.Xnorm).sum(0)
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self.dbeta[:] = dY.sum(0)
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else:
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dXnorm = dY
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dstd = (dXnorm * self.center).sum(0) / -self.var
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dcenter = dXnorm / self.std + dstd / self.std * self.center / length
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dmean = -dcenter.sum(0)
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dX = dcenter + dmean / length
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return dX
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class DenseOneLess(Dense):
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def init(self, W, dW):
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super().init(W, dW)
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ins, outs = self.input_shape[0], self.output_shape[0]
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assert ins == outs, (ins, outs)
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def F(self, X):
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np.fill_diagonal(self.coeffs, 0)
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self.X = X
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Y = X.dot(self.coeffs) + self.biases
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return Y
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def dF(self, dY):
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dX = dY.dot(self.coeffs.T)
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self.dcoeffs[:] = self.X.T.dot(dY)
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self.dbiases[:] = dY.sum(0, keepdims=True)
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np.fill_diagonal(self.dcoeffs, 0)
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return dX
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# Rituals {{{1
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def stochastic_multiply(W, gamma=0.5, allow_negation=True):
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# paper: https://arxiv.org/abs/1606.01981
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assert W.ndim == 1, W.ndim
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assert 0 < gamma < 1, gamma
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size = len(W)
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alpha = np.max(np.abs(W))
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# NOTE: numpy gives [low, high) but the paper advocates [low, high]
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mult = np.random.uniform(gamma, 1/gamma, size=size)
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if allow_negation: # TODO: verify this is correct. seems to wreak havok.
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prob = (W / alpha + 1) / 2
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samples = np.random.random_sample(size=size)
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mult *= np.where(samples < prob, 1, -1)
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np.multiply(W, mult, out=W)
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class StochMRitual(Ritual):
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# paper: https://arxiv.org/abs/1606.01981
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# this probably doesn't make sense for regression problems,
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# let alone small models, but here it is anyway!
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def __init__(self, learner=None, loss=None, mloss=None, gamma=0.5):
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super().__init__(learner, loss, mloss)
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self.gamma = _f(gamma)
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def prepare(self, model):
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self.W = np.copy(model.W)
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super().prepare(model)
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def learn(self, inputs, outputs):
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# an experiment:
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#assert self.learner.rate < 10, self.learner.rate
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#self.gamma = 1 - 1/2**(1 - np.log10(self.learner.rate))
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self.W[:] = self.model.W
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for layer in self.model.ordered_nodes:
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if isinstance(layer, Dense):
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stochastic_multiply(layer.coeffs.ravel(), gamma=self.gamma,
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allow_negation=True)
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residual = super().learn(inputs, outputs)
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self.model.W[:] = self.W
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return residual
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def update(self):
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super().update()
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f = 0.5
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for layer in self.model.ordered_nodes:
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if isinstance(layer, Dense):
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np.clip(layer.W, -layer.std * f, layer.std * f, out=layer.W)
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# np.clip(layer.W, -1, 1, out=layer.W)
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class NoisyRitual(Ritual):
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def __init__(self, learner=None, loss=None, mloss=None,
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input_noise=0, output_noise=0, gradient_noise=0):
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self.input_noise = _f(input_noise)
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self.output_noise = _f(output_noise)
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self.gradient_noise = _f(gradient_noise)
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super().__init__(learner, loss, mloss)
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def learn(self, inputs, outputs):
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# this is pretty crude
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s = self.input_noise
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noisy_inputs = inputs + np.random.normal(0, s, size=inputs.shape)
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s = self.output_noise
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noisy_outputs = outputs + np.random.normal(0, s, size=outputs.shape)
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return super().learn(noisy_inputs, noisy_outputs)
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def update(self):
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# gradient noise paper: https://arxiv.org/abs/1511.06807
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if self.gradient_noise > 0:
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size = len(self.model.dW)
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gamma = 0.55
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s = self.gradient_noise / (1 + self.bn) ** gamma
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# experiments:
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#s = np.sqrt(self.learner.rate)
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#s = np.square(self.learner.rate)
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#s = self.learner.rate / self.en
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self.model.dW += np.random.normal(0, s, size=size)
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super().update()
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# Learners {{{1
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class DumbLearner(AnnealingLearner):
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# this is my own awful contraption. it's not really "SGD with restarts".
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def __init__(self, optim, epochs=100, rate=None, halve_every=10,
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restarts=0, restart_advance=20, callback=None):
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self.restart_epochs = int(epochs)
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self.restarts = int(restarts)
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self.restart_advance = float(restart_advance)
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self.restart_callback = callback
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epochs = self.restart_epochs * (self.restarts + 1)
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super().__init__(optim, epochs, rate, halve_every)
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def rate_at(self, epoch):
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sub_epoch = epoch % self.restart_epochs
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restart = epoch // self.restart_epochs
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return super().rate_at(sub_epoch) * (self.anneal**self.restart_advance)**restart
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def next(self):
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if not super().next():
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return False
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sub_epoch = self.epoch % self.restart_epochs
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restart = self.epoch // self.restart_epochs
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if restart > 0 and sub_epoch == 0:
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if self.restart_callback is not None:
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self.restart_callback(restart)
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return True
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# Components {{{1
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def _mr_make_norm(norm):
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def _mr_norm(y, width, depth, block, multi, activation, style, FC, d):
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skip = y
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merger = Sum()
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skip.feed(merger)
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z_start = skip
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z_start = z_start.feed(norm())
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z_start = z_start.feed(activation())
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for _ in range(multi):
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z = z_start
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for j in range(block):
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if j > 0:
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z = z.feed(norm())
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z = z.feed(activation())
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z = z.feed(FC())
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z.feed(merger)
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y = merger
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return y
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return _mr_norm
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def _mr_batchless(y, width, depth, block, multi, activation, style, FC, d):
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skip = y
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merger = Sum()
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skip.feed(merger)
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z_start = skip.feed(activation())
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for _ in range(multi):
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z = z_start
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for j in range(block):
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if j > 0:
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z = z.feed(activation())
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z = z.feed(FC())
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z.feed(merger)
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y = merger
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return y
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def _mr_onelesssum(y, width, depth, block, multi, activation, style, FC, d):
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# this is my own awful contraption.
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is_last = d + 1 == depth
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needs_sum = not is_last or multi > 1
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skip = y
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if needs_sum:
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merger = Sum()
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if not is_last:
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skip.feed(merger)
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z_start = skip.feed(activation())
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for _ in range(multi):
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z = z_start
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for j in range(block):
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if j > 0:
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z = z.feed(activation())
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z = z.feed(FC())
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if needs_sum:
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z.feed(merger)
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if needs_sum:
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y = merger
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else:
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y = z
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#y = y.feed(LayerNorm())
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return y
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_mr_styles = dict(
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lnorm=_mr_make_norm(LayerNorm),
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batchless=_mr_batchless,
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onelesssum=_mr_onelesssum,
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)
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def multiresnet(x, width, depth, block=2, multi=1,
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activation=Relu, style='batchless',
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init=init_he_normal):
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if style not in _mr_styles:
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raise Exception('unknown resnet style', style)
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y = x
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last_size = x.output_shape[0]
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for d in range(depth):
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size = width
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FC = lambda: Dense(size, init)
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if last_size != size:
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y = y.feed(FC())
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y = _mr_styles[style](y, width, depth, block, multi, activation, style, FC, d)
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last_size = size
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return y
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# Toy Data {{{1
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inits = dict(he_normal=init_he_normal, he_uniform=init_he_uniform)
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activations = dict(sigmoid=Sigmoid, tanh=Tanh, relu=Relu, elu=Elu, gelu=GeluApprox)
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def prettyize(data):
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if isinstance(data, np.ndarray):
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s = ', '.join(('{:8.2e}'.format(n) for n in data))
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s = '[' + s + ']'
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else:
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s = '{:8.2e}'.format(data)
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return s
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def normalize_data(data, mean=None, std=None):
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# in-place
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if mean is None or std is None:
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mean = np.mean(data, axis=0)
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std = np.std(data, axis=0)
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mean_str = prettyize(mean)
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std_str = prettyize(std)
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lament('nod(...,\n {},\n {})'.format(mean_str, std_str))
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sys.exit(1)
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data -= _f(mean)
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data /= _f(std)
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def toy_data(train_samples, valid_samples, problem=2):
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total_samples = train_samples + valid_samples
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nod = normalize_data # shorthand to keep a sane indentation
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if problem == 0:
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from ml.cie_mlp_data import inputs, outputs, valid_inputs, valid_outputs
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inputs, outputs = _f(inputs), _f(outputs)
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valid_inputs, valid_outputs = _f(valid_inputs), _f(valid_outputs)
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nod(inputs, 127.5, 73.9)
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nod(outputs, 44.8, 21.7)
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nod(valid_inputs, 127.5, 73.9)
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nod(valid_outputs, 44.8, 21.7)
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elif problem == 1:
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from sklearn.datasets import make_friedman1
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inputs, outputs = make_friedman1(total_samples)
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inputs, outputs = _f(inputs), _f(outputs)
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outputs = np.expand_dims(outputs, -1)
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nod(inputs, 0.5, 1/np.sqrt(12))
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nod(outputs, 14.4, 4.9)
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elif problem == 2:
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from sklearn.datasets import make_friedman2
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inputs, outputs = make_friedman2(total_samples)
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inputs, outputs = _f(inputs), _f(outputs)
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outputs = np.expand_dims(outputs, -1)
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nod(inputs,
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[5.00e+01, 9.45e+02, 5.01e-01, 5.98e+00],
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[2.89e+01, 4.72e+02, 2.89e-01, 2.87e+00])
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nod(outputs, [482], [380])
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elif problem == 3:
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from sklearn.datasets import make_friedman3
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inputs, outputs = make_friedman3(total_samples)
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inputs, outputs = _f(inputs), _f(outputs)
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outputs = np.expand_dims(outputs, -1)
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nod(inputs,
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[4.98e+01, 9.45e+02, 4.99e-01, 6.02e+00],
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[2.88e+01, 4.73e+02, 2.90e-01, 2.87e+00])
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nod(outputs, [1.32327931], [0.31776295])
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else:
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raise Exception("unknown toy data set", problem)
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if problem != 0:
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# split off a validation set
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indices = np.arange(inputs.shape[0])
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np.random.shuffle(indices)
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valid_inputs = inputs[indices][-valid_samples:]
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valid_outputs = outputs[indices][-valid_samples:]
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inputs = inputs[indices][:-valid_samples]
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outputs = outputs[indices][:-valid_samples]
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return (inputs, outputs), (valid_inputs, valid_outputs)
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# Model Creation {{{1
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def optim_from_config(config):
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if config.optim == 'adam':
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d1 = config.optim_decay1 if 'optim_decay1' in config else 9.5
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d2 = config.optim_decay2 if 'optim_decay2' in config else 999.5
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b1 = np.exp(-1/d1)
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b2 = np.exp(-1/d2)
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o = Nadam if config.nesterov else Adam
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optim = o(b1=b1, b2=b2)
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elif config.optim in ('rms', 'rmsprop'):
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d2 = config.optim_decay2 if 'optim_decay2' in config else 99.5
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mu = np.exp(-1/d2)
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optim = RMSprop(mu=mu)
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elif config.optim == 'sgd':
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if config.momentum != 0:
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optim = Momentum(mu=config.momentum, nesterov=config.nesterov)
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else:
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optim = Optimizer()
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else:
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raise Exception('unknown optimizer', config.optim)
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return optim
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def learner_from_config(config, optim, rscb):
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if config.learner == 'sgdr':
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expando = config.expando if 'expando' in config else None
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learner = SGDR(optim, epochs=config.epochs, rate=config.learn,
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restart_decay=config.restart_decay, restarts=config.restarts,
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callback=rscb, expando=expando)
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# final learning rate isn't of interest here; it's gonna be close to 0.
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log('total epochs', learner.epochs)
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elif config.learner == 'anneal':
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learner = AnnealingLearner(optim, epochs=config.epochs, rate=config.learn,
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halve_every=config.learn_halve_every)
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elif config.learner == 'dumb':
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learner = DumbLearner(optim, epochs=config.epochs, rate=config.learn,
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halve_every=config.learn_halve_every,
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restarts=config.restarts,
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restart_advance=config.learn_restart_advance,
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callback=rscb)
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log("final learning rate", "{:10.8f}".format(learner.final_rate))
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elif config.learner == 'sgd':
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learner = Learner(optim, epochs=config.epochs, rate=config.learn)
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log("final learning rate", "{:10.8f}".format(learner.final_rate))
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else:
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raise Exception('unknown learner', config.learner)
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return learner
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def lookup_loss(maybe_name):
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if isinstance(maybe_name, Loss):
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return maybe_name
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elif maybe_name == 'mse':
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return Squared()
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elif maybe_name == 'mshe': # mushy
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return SquaredHalved()
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elif maybe_name == 'mae':
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return Absolute()
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elif maybe_name == 'msee':
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return SomethingElse()
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raise Exception('unknown objective', maybe_name)
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def ritual_from_config(config, learner, loss, mloss):
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if config.ritual == 'default':
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ritual = Ritual(learner=learner, loss=loss, mloss=mloss)
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elif config.ritual == 'stochm':
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ritual = StochMRitual(learner=learner, loss=loss, mloss=mloss)
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elif config.ritual == 'noisy':
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ritual = NoisyRitual(learner=learner, loss=loss, mloss=mloss,
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input_noise=1e-1, output_noise=1e-2,
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gradient_noise=2e-7)
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else:
|
|
raise Exception('unknown ritual', config.ritual)
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|
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|
return ritual
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|
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|
def model_from_config(config, input_features, output_features, callbacks):
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|
# Our Test Model
|
|
|
|
init = inits[config.init]
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activation = activations[config.activation]
|
|
|
|
x = Input(shape=(input_features,))
|
|
y = x
|
|
y = multiresnet(y,
|
|
config.res_width, config.res_depth,
|
|
config.res_block, config.res_multi,
|
|
activation=activation, init=init,
|
|
style=config.parallel_style)
|
|
if y.output_shape[0] != output_features:
|
|
y = y.feed(Dense(output_features, init))
|
|
|
|
model = Model(x, y, unsafe=config.unsafe)
|
|
|
|
if config.fn_load is not None:
|
|
log('loading weights', config.fn_load)
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|
model.load_weights(config.fn_load)
|
|
|
|
optim = optim_from_config(config)
|
|
|
|
def rscb(restart):
|
|
callbacks.restart()
|
|
log("restarting", restart)
|
|
if config.restart_optim:
|
|
optim.reset()
|
|
|
|
learner = learner_from_config(config, optim, rscb)
|
|
|
|
loss = lookup_loss(config.loss)
|
|
mloss = lookup_loss(config.mloss) if config.mloss else loss
|
|
|
|
ritual = ritual_from_config(config, learner, loss, mloss)
|
|
|
|
return model, learner, ritual
|
|
|
|
# main program {{{1
|
|
|
|
def run(program, args=None):
|
|
args = args if args else []
|
|
|
|
np.random.seed(42069)
|
|
|
|
# Config {{{2
|
|
|
|
from dotmap import DotMap
|
|
config = DotMap(
|
|
fn_load = None,
|
|
fn_save = 'optim_nn.h5',
|
|
log_fn = 'losses.npz',
|
|
|
|
# multi-residual network parameters
|
|
res_width = 28,
|
|
res_depth = 2,
|
|
res_block = 3, # normally 2 for plain resnet
|
|
res_multi = 2, # normally 1 for plain resnet
|
|
|
|
# style of resnet (order of layers, which layers, etc.)
|
|
parallel_style = 'onelesssum',
|
|
activation = 'gelu',
|
|
|
|
optim = 'adam',
|
|
optim_decay1 = 2, # given in epochs (optional)
|
|
optim_decay2 = 100, # given in epochs (optional)
|
|
momentum = 0.90, # only used with SGD
|
|
nesterov = True, # only used with SGD or Adam
|
|
batch_size = 64,
|
|
|
|
# learning parameters
|
|
learner = 'sgdr',
|
|
learn = 1e-2,
|
|
epochs = 24,
|
|
learn_halve_every = 16, # only used with anneal/dumb
|
|
restarts = 2,
|
|
restart_decay = 0.25, # only used with SGDR
|
|
expando = lambda i: 24 * i,
|
|
|
|
# misc
|
|
init = 'he_normal',
|
|
loss = 'msee',
|
|
mloss = 'mse',
|
|
ritual = 'default',
|
|
restart_optim = False, # restarts also reset internal state of optimizer
|
|
warmup = True,
|
|
log10_loss = True, # personally, i'm sick of looking linear loss values!
|
|
|
|
problem = 3,
|
|
compare = (
|
|
# best results for ~10,000 parameters
|
|
# training/validation pairs for each problem (starting from problem 0):
|
|
#(5.08e-05, 6.78e-05),
|
|
(7.577717e-04, 1.255284e-03),
|
|
# 1080 epochs on these...
|
|
(1.790511e-07, 2.785208e-07),
|
|
(2.233277e-08, 3.580281e-08),
|
|
(5.266719e-07, 5.832677e-06), # overfitting? bad valid set?
|
|
),
|
|
|
|
unsafe = True, # aka gotta go fast mode
|
|
)
|
|
|
|
for k in ['parallel_style', 'activation', 'optim', 'learner',
|
|
'init', 'loss', 'mloss', 'ritual']:
|
|
config[k] = config[k].lower()
|
|
|
|
config.pprint()
|
|
|
|
# Toy Data {{{2
|
|
|
|
(inputs, outputs), (valid_inputs, valid_outputs) = \
|
|
toy_data(2**14, 2**11, problem=config.problem)
|
|
input_features = inputs.shape[-1]
|
|
output_features = outputs.shape[-1]
|
|
|
|
callbacks = Dummy()
|
|
|
|
model, learner, ritual = \
|
|
model_from_config(config, input_features, output_features, callbacks)
|
|
|
|
# Model Information {{{2
|
|
|
|
for node in model.ordered_nodes:
|
|
children = [str(n) for n in node.children]
|
|
if children:
|
|
sep = '->'
|
|
print(str(node) + sep + ('\n' + str(node) + sep).join(children))
|
|
log('parameters', model.param_count)
|
|
|
|
# Training {{{2
|
|
|
|
batch_losses = []
|
|
train_losses = []
|
|
valid_losses = []
|
|
|
|
def measure_error():
|
|
def print_error(name, inputs, outputs, comparison=None):
|
|
predicted = model.forward(inputs)
|
|
err = ritual.measure(predicted, outputs)
|
|
log(name + " loss", "{:12.6e}".format(err))
|
|
if config.log10_loss:
|
|
log(name + " log10-loss", "{:+6.3f}".format(np.log10(err)))
|
|
elif comparison:
|
|
fmt = "10**({:+7.4f}) times"
|
|
log("improvement", fmt.format(np.log10(comparison / err)))
|
|
return err
|
|
|
|
train_err = print_error("train",
|
|
inputs, outputs,
|
|
config.compare[config.problem][0])
|
|
valid_err = print_error("valid",
|
|
valid_inputs, valid_outputs,
|
|
config.compare[config.problem][1])
|
|
train_losses.append(train_err)
|
|
valid_losses.append(valid_err)
|
|
|
|
callbacks.restart = measure_error
|
|
|
|
training = config.epochs > 0 and config.restarts >= 0
|
|
|
|
ritual.prepare(model)
|
|
|
|
if training and config.warmup:
|
|
log("warming", "up")
|
|
|
|
# use plain SGD in warmup to prevent (or possibly cause?) numeric issues
|
|
temp_optim = learner.optim
|
|
learner.optim = Optimizer(alpha=0.01)
|
|
|
|
for _ in range(2):
|
|
ritual.train_batched(
|
|
np.random.normal(size=inputs.shape),
|
|
np.random.normal(size=outputs.shape),
|
|
config.batch_size)
|
|
ritual.reset()
|
|
|
|
learner.optim = temp_optim
|
|
|
|
if training:
|
|
measure_error()
|
|
|
|
while training and learner.next():
|
|
indices = np.arange(inputs.shape[0])
|
|
np.random.shuffle(indices)
|
|
shuffled_inputs = inputs[indices]
|
|
shuffled_outputs = outputs[indices]
|
|
|
|
avg_loss, losses = ritual.train_batched(
|
|
shuffled_inputs, shuffled_outputs,
|
|
config.batch_size,
|
|
return_losses=True)
|
|
batch_losses += losses
|
|
|
|
#log("learning rate", "{:10.8f}".format(learner.rate))
|
|
#log("average loss", "{:11.7f}".format(avg_loss))
|
|
if config.log10_loss:
|
|
fmt = "epoch {:4.0f}, rate {:10.8f}, log10-loss {:+6.3f}"
|
|
log("info", fmt.format(learner.epoch + 1, learner.rate, np.log10(avg_loss)))
|
|
else:
|
|
fmt = "epoch {:4.0f}, rate {:10.8f}, loss {:12.6e}"
|
|
log("info", fmt.format(learner.epoch + 1, learner.rate, avg_loss))
|
|
|
|
measure_error()
|
|
|
|
if training and config.fn_save is not None:
|
|
log('saving weights', config.fn_save)
|
|
model.save_weights(config.fn_save, overwrite=True)
|
|
|
|
if training and config.log_fn is not None:
|
|
log('saving losses', config.log_fn)
|
|
np.savez_compressed(config.log_fn,
|
|
batch_losses=np.array(batch_losses, dtype=_f),
|
|
train_losses=np.array(train_losses, dtype=_f),
|
|
valid_losses=np.array(valid_losses, dtype=_f))
|
|
|
|
# Evaluation {{{2
|
|
# TODO: write this portion again
|
|
|
|
return 0
|
|
|
|
# run main program {{{1
|
|
|
|
if __name__ == '__main__':
|
|
sys.exit(run(sys.argv[0], sys.argv[1:]))
|